EnhancerDB
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  3. rs562368371[chr1:208344758]
Enhancers that have rs562368371[chr1:208344758]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 208343485 208368555 enh12612
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs562368371[chr1:208344758]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 208344750 208344760 GSC2 JASPAR yes 34902672
chr1 208344751 208344759 OTX1 JASPAR yes 34902673
chr1 208344751 208344759 OTX2 JASPAR yes 34902674
chr1 208344754 208344769 MEF2C JASPAR yes 34902675
chr1 208344755 208344770 MEF2A JASPAR yes 34902676
Genes associated with rs562368371[chr1:208344758], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More