EnhancerDB
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  3. rs562372479[chr1:41423648]
Enhancers that have rs562372479[chr1:41423648]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41400705 41424275 enh11780
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Liver Bone (Osteoblast) Placenta Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Uterus Stomach
Transcript factors that have rs562372479[chr1:41423648]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41423633 41423648 FOXP1 JASPAR yes 28359987
chr1 41423634 41423649 FOXP1 JASPAR yes 28359988
chr1 41423635 41423650 FOXP1 JASPAR yes 28359989
chr1 41423635 41423656 IRF1 JASPAR yes 28359990
chr1 41423636 41423651 FOXP1 JASPAR yes 28359991
chr1 41423636 41423657 IRF1 JASPAR yes 28359992
chr1 41423637 41423652 FOXP1 JASPAR yes 28359993
chr1 41423637 41423658 IRF1 JASPAR yes 28359994
chr1 41423638 41423653 FOXP1 JASPAR yes 28359995
chr1 41423640 41423655 FOXP1 JASPAR yes 28359996
chr1 41423641 41423662 IRF1 JASPAR yes 28359997
chr1 41423642 41423657 FOXP1 JASPAR yes 28359998
chr1 41423642 41423663 IRF1 JASPAR yes 28359999
chr1 41423647 41423662 FOXP1 JASPAR yes 28360000
chr1 41423648 41423669 IRF1 JASPAR yes 28360001
Genes associated with rs562372479[chr1:41423648], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More