EnhancerDB
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  3. rs562380272[chr1:25075000]
Enhancers that have rs562380272[chr1:25075000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25071165 25083012 enh140
Astrocyte Blood (OCI-LY7) Stomach Muscle (A673) Placenta Uterus Blood (Karpas-422) Neural Stem Cells (H9) Heart
Transcript factors that have rs562380272[chr1:25075000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25074984 25075005 IRF1 JASPAR yes 27526301
chr1 25074985 25075000 FOXP1 JASPAR yes 27526303
chr1 25074985 25075006 IRF1 JASPAR yes 27526304
chr1 25074986 25075001 STAT2 JASPAR yes 27526307
chr1 25074986 25075007 IRF1 JASPAR yes 27526308
chr1 25074987 25075002 FOXP1 JASPAR yes 27526309
chr1 25074987 25075008 IRF1 JASPAR yes 27526310
chr1 25074988 25075009 IRF1 JASPAR yes 27526311
chr1 25074989 25075004 FOXP1 JASPAR yes 27526312
chr1 25074989 25075010 IRF1 JASPAR yes 27526313
chr1 25074990 25075005 FOXP1 JASPAR yes 27526314
chr1 25074990 25075011 IRF1 JASPAR yes 27526315
chr1 25074991 25075006 FOXP1 JASPAR yes 27526316
chr1 25074991 25075012 IRF1 JASPAR yes 27526317
chr1 25074992 25075007 FOXP1 JASPAR yes 27526318
chr1 25074992 25075013 IRF1 JASPAR yes 27526319
chr1 25074993 25075008 FOXP1 JASPAR yes 27526320
chr1 25074993 25075014 IRF1 JASPAR yes 27526321
chr1 25074994 25075009 FOXP1 JASPAR yes 27526322
chr1 25074995 25075010 FOXP1 JASPAR yes 27526323
chr1 25074996 25075011 FOXP1 JASPAR yes 27526324
chr1 25074997 25075012 FOXP1 JASPAR yes 27526325
chr1 25074998 25075013 FOXP1 JASPAR yes 27526326
chr1 25074999 25075014 FOXP1 JASPAR yes 27526327
chr1 25075000 25075015 FOXP1 JASPAR yes 27526328
Genes associated with rs562380272[chr1:25075000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More