EnhancerDB
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  3. rs562389986[chr2:233452058]
Enhancers that have rs562389986[chr2:233452058]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 233450537 233460339 enh34400
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung (A549) Colon (HCT116) Thyroid Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Stomach
Transcript factors that have rs562389986[chr2:233452058]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 233452054 233452060 SP1 TRANSFAC yes 81781568
chr2 233452055 233452076 IRF1 JASPAR yes 81781569
chr2 233452057 233452078 IRF1 JASPAR yes 81781570
chr2 233452058 233452079 IRF1 JASPAR yes 81781571
Genes associated with rs562389986[chr2:233452058], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More