EnhancerDB
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  3. rs56240884[chr2:28940154]
Enhancers that have rs56240884[chr2:28940154]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28928585 28946675 enh18396
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs56240884[chr2:28940154]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28940142 28940158 SOX8 JASPAR yes 72673120
chr2 28940144 28940154 SP1 JASPAR yes 72673121
chr2 28940154 28940165 FOXA1 JASPAR yes 72673123
Genes associated with rs56240884[chr2:28940154], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More