EnhancerDB
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  3. rs562462620[chr19:13145255]
Enhancers that have rs562462620[chr19:13145255]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13138760 13157647 enh17929
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562462620[chr19:13145255]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13144034 13145543 TCF7L2 GTRD no Colon (HCT116) 21850225
chr19 13144034 13145543 TCF7L2 GTRD no Colon (HCT116) 108387577
chr19 13144864 13145384 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108387589
chr19 13144869 13145489 CTCF UCSC Txn Factor no Conserved 108387590
chr19 13144889 13145279 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108387593
chr19 13144889 13145285 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21850233
chr19 13144889 13145285 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108387594
Genes associated with rs562462620[chr19:13145255], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More