EnhancerDB
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  3. rs562474416[chr1:178023478]
Enhancers that have rs562474416[chr1:178023478]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178015665 178033840 enh12406
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Lung (PC-9) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs562474416[chr1:178023478]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178021610 178023866 ZNF274 GTRD no Liver (HepG2) 21352345
chr1 178022849 178023759 ZNF274 GTRD no Liver (HepG2) 21352385
chr1 178022992 178023766 ZNF274 GTRD no Liver (HepG2) 21352386
chr1 178023032 178023743 ZNF274 GTRD no Liver (HepG2) 21352387
chr1 178023050 178023722 ZNF274 GTRD no Liver (HepG2) 21352388
chr1 178023056 178023771 ZNF274 GTRD no Liver (HepG2) 21352389
chr1 178023065 178023854 ZNF274 GTRD no Liver (HepG2) 21352390
chr1 178023067 178023655 ZNF274 GTRD no Liver (HepG2) 21352391
chr1 178023074 178023735 ZNF274 GTRD no Liver (HepG2) 21352392
chr1 178023080 178023738 ZNF274 GTRD no Liver (HepG2) 21352393
chr1 178023087 178023776 ZNF274 GTRD no Liver (HepG2) 21352394
chr1 178023152 178023738 ZNF274 GTRD no Liver (HepG2) 21352395
chr1 178023272 178023715 ZNF274 GTRD no Liver (HepG2) 21352396
chr1 178023282 178023732 ZNF274 GTRD no Liver (HepG2) 21352397
chr1 178023284 178023751 ZNF274 GTRD no Liver (HepG2) 21352398
chr1 178023293 178023769 ZNF274 GTRD no Liver (HepG2) 21352399
chr1 178023391 178023780 ZNF274 GTRD no Liver (HepG2) 21352400
chr1 178023398 178023673 ZNF274 GTRD no Liver (HepG2) 21352401
chr1 178023422 178023707 ZNF274 GTRD no Liver (HepG2) 21352402
chr1 178023463 178023478 FOXA1 JASPAR yes 33389985
chr1 178023463 178023479 POU4F2 JASPAR yes 33389986
chr1 178023463 178023479 POU4F3 JASPAR yes 33389987
chr1 178023466 178023480 ONECUT2 JASPAR yes 33389993
chr1 178023466 178023480 ONECUT3 JASPAR yes 33389994
chr1 178023466 178023481 FOXP1 JASPAR yes 33389995
chr1 178023466 178023481 HNF1A JASPAR yes 33389996
chr1 178023467 178023481 POU4F1 JASPAR yes 33389997
chr1 178023467 178023482 FOXA1 JASPAR yes 33389998
chr1 178023467 178023483 POU4F2 JASPAR yes 33389999
chr1 178023467 178023483 POU4F3 JASPAR yes 33390000
chr1 178023468 178023479 FOXB1 JASPAR yes 33390001
chr1 178023468 178023479 FOXC1 JASPAR yes 33390002
chr1 178023468 178023479 PROP1 JASPAR yes 33390003
chr1 178023468 178023480 FOXC2 JASPAR yes 33390004
chr1 178023469 178023481 FOXI1 JASPAR yes 33390005
chr1 178023470 178023484 ONECUT2 JASPAR yes 33390006
chr1 178023470 178023484 ONECUT3 JASPAR yes 33390007
chr1 178023470 178023484 POU4F1 JASPAR yes 33390008
chr1 178023470 178023485 HNF1A JASPAR yes 33390009
chr1 178023471 178023484 HNF1B JASPAR yes 33390010
chr1 178023471 178023485 POU4F1 JASPAR yes 33390011
chr1 178023471 178023486 FOXA1 JASPAR yes 33390012
chr1 178023471 178023487 POU4F2 JASPAR yes 33390013
chr1 178023471 178023487 POU4F3 JASPAR yes 33390014
chr1 178023472 178023483 FOXB1 JASPAR yes 33390015
chr1 178023472 178023483 FOXC1 JASPAR yes 33390016
chr1 178023472 178023483 PROP1 JASPAR yes 33390017
chr1 178023472 178023484 FOXC2 JASPAR yes 33390018
chr1 178023473 178023485 FOXI1 JASPAR yes 33390019
Genes associated with rs562474416[chr1:178023478], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More