EnhancerDB
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  3. rs562476466[chr17:62987765]
Enhancers that have rs562476466[chr17:62987765]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562476466[chr17:62987765]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62985563 62989044 ZNF143 GTRD no Epithelial (MCF-7) 21780807
chr17 62985563 62989044 ZNF143 GTRD no Epithelial (MCF-7) 108283232
chr17 62985932 62987976 ZNF143 GTRD no Epithelial (MCF-7) 21780808
chr17 62985932 62987976 ZNF143 GTRD no Epithelial (MCF-7) 108283233
chr17 62985937 62987943 ZNF143 GTRD no Epithelial (MCF-7) 21780809
chr17 62985937 62987943 ZNF143 GTRD no Epithelial (MCF-7) 108283234
chr17 62985993 62987924 ZNF143 GTRD no Epithelial (MCF-7) 21780810
chr17 62985993 62987924 ZNF143 GTRD no Epithelial (MCF-7) 108283235
chr17 62985996 62987924 ZNF143 GTRD no Epithelial (MCF-7) 21780811
chr17 62985996 62987924 ZNF143 GTRD no Epithelial (MCF-7) 108283236
chr17 62986008 62987908 ZNF143 GTRD no Epithelial (MCF-7) 21780812
chr17 62986008 62987908 ZNF143 GTRD no Epithelial (MCF-7) 108283237
chr17 62986015 62987933 ZNF143 GTRD no Epithelial (MCF-7) 21780813
chr17 62986015 62987933 ZNF143 GTRD no Epithelial (MCF-7) 108283238
chr17 62986070 62987923 ZNF143 GTRD no Epithelial (MCF-7) 21780814
chr17 62986070 62987923 ZNF143 GTRD no Epithelial (MCF-7) 108283239
chr17 62986583 62987918 ZBTB33 GTRD no Lung (A549) 21780818
chr17 62986583 62987918 ZBTB33 GTRD no Lung (A549) 108283242
chr17 62986680 62987837 ZNF143 GTRD no Epithelial (MCF-7) 21780819
chr17 62986680 62987837 ZNF143 GTRD no Epithelial (MCF-7) 108283243
chr17 62986741 62987951 ZBTB33 GTRD no Lung (A549) 21780821
chr17 62986741 62987951 ZBTB33 GTRD no Lung (A549) 108283244
chr17 62986742 62987909 ZNF143 GTRD no Epithelial (MCF-7) 21780822
chr17 62986742 62987909 ZNF143 GTRD no Epithelial (MCF-7) 108283245
chr17 62986746 62987927 ZNF143 GTRD no Epithelial (MCF-7) 21780823
chr17 62986746 62987927 ZNF143 GTRD no Epithelial (MCF-7) 108283246
chr17 62986796 62988001 ZNF274 GTRD no Cervix (HeLa-S3) 21780826
chr17 62986796 62988001 ZNF274 GTRD no Cervix (HeLa-S3) 108283249
chr17 62986847 62987896 ZNF143 GTRD no Epithelial (MCF-7) 21780827
chr17 62986847 62987896 ZNF143 GTRD no Epithelial (MCF-7) 108283250
chr17 62986962 62987794 ZNF274 GTRD no Bone Marrow (K562) 21780829
chr17 62986962 62987794 ZNF274 GTRD no Bone Marrow (K562) 108283252
chr17 62986974 62987878 ZBTB33 GTRD no Brain (SK-N-SH) 21780833
chr17 62986974 62987878 ZBTB33 GTRD no Brain (SK-N-SH) 108283256
chr17 62987012 62987880 ZBTB33 GTRD no Lung (A549) 21780836
chr17 62987012 62987880 ZBTB33 GTRD no Lung (A549) 108283259
chr17 62987054 62987809 TCF7L2 GTRD no Colon (HCT116) 21780840
chr17 62987054 62987809 TCF7L2 GTRD no Colon (HCT116) 108283263
chr17 62987759 62987780 IRF1 JASPAR yes 55336342
chr17 62987763 62987778 FOXP1 JASPAR yes 55336343
chr17 62987764 62987779 FOXP1 JASPAR yes 55336344
chr17 62987765 62987780 FOXP1 JASPAR yes 55336345
Genes associated with rs562476466[chr17:62987765], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More