EnhancerDB
  1. Home
  2. SNP
  3. rs562514574[chr11:122989232]
Enhancers that have rs562514574[chr11:122989232]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122987085 123025975 enh14347
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562514574[chr11:122989232]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 122989214 122989544 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21519749
chr11 122989214 122989544 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108004596
chr11 122989221 122989232 FOXC1 JASPAR yes 42045810
chr11 122989221 122989233 FOXC2 JASPAR yes 42045811
Genes associated with rs562514574[chr11:122989232], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More