EnhancerDB
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  3. rs562522882[chr3:56804439]
Enhancers that have rs562522882[chr3:56804439]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56786742 56805635 enh20640
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Uterus Blood (T-cell) Heart
Transcript factors that have rs562522882[chr3:56804439]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56804435 56804449 IRF7 JASPAR yes 2592632
chr3 56804439 56804450 DUX4 JASPAR yes 2592633
chr3 56804439 56804450 PHOX2A JASPAR yes 2592634
chr3 56804439 56804450 PROP1 JASPAR yes 2592635
Genes associated with rs562522882[chr3:56804439], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More