EnhancerDB
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  3. rs562530212[chr12:108704698]
Enhancers that have rs562530212[chr12:108704698]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 108689886 108710415 enh14968
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs562530212[chr12:108704698]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 108704683 108704703 TP53 JASPAR yes 123591435
chr12 108704691 108704701 MAX JASPAR yes 123591436
chr12 108704691 108704703 HES5 JASPAR yes 123591437
chr12 108704692 108704702 CLOCK JASPAR yes 123591438
chr12 108704692 108704702 HEY1 JASPAR yes 123591439
chr12 108704692 108704702 HEY2 JASPAR yes 123591440
chr12 108704692 108704702 MAX JASPAR yes 123591441
chr12 108704694 108704699 MYC TRANSFAC yes 123591442
chr12 108704694 108704699 USF1 TRANSFAC yes 123591443
chr12 108704694 108704699 USF2 TRANSFAC yes 123591444
chr12 108704697 108704710 SMAD2 JASPAR yes 123591445
Genes associated with rs562530212[chr12:108704698], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More