EnhancerDB
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  3. rs562537028[chr1:183290946]
Enhancers that have rs562537028[chr1:183290946]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 183285213 183302835 enh12451
Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs562537028[chr1:183290946]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 183290928 183290949 IRF1 JASPAR yes 33672843
chr1 183290932 183290946 ONECUT3 JASPAR yes 33672845
chr1 183290934 183290954 RREB1 JASPAR yes 33672846
chr1 183290934 183290955 IRF1 JASPAR yes 33672847
chr1 183290936 183290951 STAT2 JASPAR yes 33672848
chr1 183290938 183290953 IRF9 JASPAR yes 33672849
chr1 183290939 183290951 IRF1 JASPAR yes 33672850
chr1 183290939 183290959 RREB1 JASPAR yes 33672851
chr1 183290940 183290961 IRF1 JASPAR yes 33672852
chr1 183290941 183290947 TCF4 TRANSFAC yes 33672853
chr1 183290941 183290956 FOXP1 JASPAR yes 33672854
chr1 183290944 183290956 IRF1 JASPAR yes 33672855
chr1 183290944 183290964 RREB1 JASPAR yes 33672856
chr1 183290945 183290966 IRF1 JASPAR yes 33672857
chr1 183290946 183290952 TCF4 TRANSFAC yes 33672858
chr1 183290946 183290961 FOXP1 JASPAR yes 33672859
Genes associated with rs562537028[chr1:183290946], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More