EnhancerDB
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  3. rs56254208[chr17:49019231]
Enhancers that have rs56254208[chr17:49019231]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56254208[chr17:49019231]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49017994 49019671 ZNF274 GTRD no Liver (HepG2) 21771413
chr17 49018569 49019246 ZNF274 GTRD no Liver (HepG2) 21771417
chr17 49018662 49019282 ZNF274 GTRD no Liver (HepG2) 21771418
chr17 49018752 49019455 ZNF274 GTRD no Liver (HepG2) 21771422
chr17 49018755 49019413 ZNF274 GTRD no Bone Marrow (K562) 21771423
chr17 49018837 49019382 ZNF274 GTRD no Bone Marrow (K562) 21771424
chr17 49018975 49019451 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771425
chr17 49019218 49019239 IRF1 JASPAR yes 54736962
chr17 49019222 49019234 IRF1 JASPAR yes 54736963
chr17 49019223 49019238 MEF2A JASPAR yes 54736964
chr17 49019224 49019239 FOXP1 JASPAR yes 54736965
chr17 49019224 49019239 MEF2C JASPAR yes 54736966
chr17 49019224 49019245 IRF1 JASPAR yes 54736967
chr17 49019225 49019237 FOXC2 JASPAR yes 54736968
chr17 49019225 49019237 MEF2A JASPAR yes 54736969
chr17 49019225 49019237 MEF2B JASPAR yes 54736970
chr17 49019225 49019237 MEF2D JASPAR yes 54736971
chr17 49019226 49019236 MEF2A JASPAR yes 54736972
chr17 49019227 49019231 YY1 TRANSFAC yes 54736973
chr17 49019228 49019240 IRF1 JASPAR yes 54736974
chr17 49019230 49019245 HNF1A JASPAR yes 54736975
Genes associated with rs56254208[chr17:49019231], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More