EnhancerDB
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  3. rs562542245[chr6:139453824]
Enhancers that have rs562542245[chr6:139453824]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 139453205 139487395 enh9385
Skin (Keratinocyte) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs562542245[chr6:139453824]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 139453817 139453827 HOXB13 JASPAR yes 105766618
chr6 139453817 139453827 HOXD13 JASPAR yes 105766619
chr6 139453817 139453828 HOXA10 JASPAR yes 105766620
chr6 139453822 139453827 MYB TRANSFAC yes 105766621
chr6 139453823 139453839 POU4F2 JASPAR yes 105766622
Genes associated with rs562542245[chr6:139453824], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More