EnhancerDB
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  3. rs562551628[chr1:27851005]
Enhancers that have rs562551628[chr1:27851005]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27840205 27858326 enh176
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562551628[chr1:27851005]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27850985 27851005 RREB1 JASPAR yes 27704885
chr1 27850987 27851007 RREB1 JASPAR yes 27704886
chr1 27850989 27851009 RREB1 JASPAR yes 27704887
chr1 27850991 27851011 RREB1 JASPAR yes 27704888
chr1 27850993 27851013 RREB1 JASPAR yes 27704889
Genes associated with rs562551628[chr1:27851005], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More