EnhancerDB
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  3. rs562552028[chr15:40365284]
Enhancers that have rs562552028[chr15:40365284]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40353665 40379655 enh16061
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562552028[chr15:40365284]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40364691 40365381 TCF7L2 GTRD no Colon (HCT116) 21649879
chr15 40365282 40365290 MEIS2 JASPAR yes 22926583
chr15 40365282 40365290 MEIS3 JASPAR yes 22926584
chr15 40365283 40365287 NFE TRANSFAC yes 22926585
chr15 40365283 40365290 MEIS1 JASPAR yes 22926586
Genes associated with rs562552028[chr15:40365284], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More