EnhancerDB
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  3. rs562560514[chr17:40398261]
Enhancers that have rs562560514[chr17:40398261]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40390345 40414201 enh4414
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
Transcript factors that have rs562560514[chr17:40398261]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40398246 40398264 NR3C1 JASPAR yes 54288905
chr17 40398255 40398263 FEV JASPAR yes 54288907
chr17 40398255 40398266 CEBPA JASPAR yes 54288908
chr17 40398261 40398264 MYB TRANSFAC yes 54288909
Genes associated with rs562560514[chr17:40398261], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More