EnhancerDB
  1. Home
  2. SNP
  3. rs562574422[chr3:56792081]
Enhancers that have rs562574422[chr3:56792081]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56786742 56805635 enh20640
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Uterus Blood (T-cell) Heart
Transcript factors that have rs562574422[chr3:56792081]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56792076 56792081 SP1 TRANSFAC yes 2590512
chr3 56792081 56792092 USF1 JASPAR yes 2590513
chr3 56792081 56792092 USF2 JASPAR yes 2590514
Genes associated with rs562574422[chr3:56792081], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More