EnhancerDB
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  3. rs562609853[chr10:33409706]
Enhancers that have rs562609853[chr10:33409706]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 33393842 33437095 enh1172
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs562609853[chr10:33409706]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 33409696 33409717 IRF1 JASPAR yes 126572925
chr10 33409697 33409712 FOXP1 JASPAR yes 126572928
chr10 33409697 33409718 IRF1 JASPAR yes 126572929
chr10 33409698 33409709 FOXP2 JASPAR yes 126572930
chr10 33409698 33409710 FOXC2 JASPAR yes 126572931
chr10 33409698 33409713 STAT2 JASPAR yes 126572932
chr10 33409698 33409719 IRF1 JASPAR yes 126572933
chr10 33409699 33409714 FOXP1 JASPAR yes 126572934
chr10 33409699 33409720 IRF1 JASPAR yes 126572935
chr10 33409700 33409721 IRF1 JASPAR yes 126572936
chr10 33409701 33409716 FOXP1 JASPAR yes 126572937
chr10 33409702 33409717 FOXP1 JASPAR yes 126572938
chr10 33409703 33409718 FOXP1 JASPAR yes 126572939
chr10 33409704 33409719 FOXP1 JASPAR yes 126572940
chr10 33409704 33409724 RREB1 JASPAR yes 126572941
chr10 33409705 33409720 FOXP1 JASPAR yes 126572942
chr10 33409706 33409721 FOXP1 JASPAR yes 126572943
Genes associated with rs562609853[chr10:33409706], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More