EnhancerDB
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  3. rs562631339[chr16:21523422]
Enhancers that have rs562631339[chr16:21523422]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 21511505 21540535 enh3934
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs562631339[chr16:21523422]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 21522750 21528364 ZNF274 GTRD no Liver (HepG2) 21696708
chr16 21522767 21524671 ZNF274 GTRD no Liver (HepG2) 21696709
chr16 21522795 21524297 ZNF274 GTRD no Cervix (HeLa-S3) 21696712
chr16 21522826 21526554 ZNF274 GTRD no Liver (HepG2) 21696717
chr16 21522884 21526510 ZNF274 GTRD no Liver (HepG2) 21696722
chr16 21523049 21527657 TEF1 GTRD no Bone (Osteoblast) 21696724
chr16 21523138 21524081 ZNF274 GTRD no Bone Marrow (K562) 21696725
chr16 21523265 21524076 ZNF143 GTRD no Epithelial (MCF-7) 21696726
chr16 21523300 21525965 ZNF274 GTRD no Liver (HepG2) 21696727
chr16 21523303 21524101 ZNF274 GTRD no Liver (HepG2) 21696728
chr16 21523311 21524063 ZNF143 GTRD no Epithelial (MCF-7) 21696729
chr16 21523333 21524594 ZNF274 GTRD no Liver (HepG2) 21696730
chr16 21523347 21524040 TCF7L2 GTRD no Colon (HCT116) 21696731
chr16 21523353 21524088 ZNF143 GTRD no Epithelial (MCF-7) 21696732
chr16 21523354 21524054 ZNF274 GTRD no Liver (HepG2) 21696733
chr16 21523361 21526849 ZNF143 GTRD no Epithelial (MCF-7) 21696734
chr16 21523364 21524040 TCF7L2 GTRD no Colon (HCT116) 21696735
chr16 21523365 21524161 ZNF274 GTRD no Liver (HepG2) 21696736
chr16 21523366 21524037 TCF7L2 GTRD no Colon (HCT116) 21696737
chr16 21523381 21524736 ZNF274 GTRD no Liver (HepG2) 21696738
chr16 21523387 21524001 TCF7L2 GTRD no Colon (HCT116) 21696739
chr16 21523408 21523423 TFAP2C JASPAR yes 9928267
chr16 21523411 21523422 EBF1 JASPAR yes 9928268
chr16 21523411 21524602 ZNF274 GTRD no Liver (HepG2) 21696740
chr16 21523418 21523424 MAZ TRANSFAC yes 9928269
Genes associated with rs562631339[chr16:21523422], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More