EnhancerDB
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  3. rs562653849[chr6:139457613]
Enhancers that have rs562653849[chr6:139457613]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 139453205 139487395 enh9385
Skin (Keratinocyte) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs562653849[chr6:139457613]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 139457599 139457614 FOXA1 JASPAR yes 105767244
chr6 139457610 139457626 SRF JASPAR yes 105767246
chr6 139457611 139457618 NKX3-1 JASPAR yes 105767247
Genes associated with rs562653849[chr6:139457613], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More