EnhancerDB
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  3. rs562660020[chr12:121297790]
Enhancers that have rs562660020[chr12:121297790]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 121282565 121298722 enh2642
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673)
Transcript factors that have rs562660020[chr12:121297790]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 121297777 121297792 STAT1 JASPAR yes 124191024
chr12 121297779 121297790 STAT1 JASPAR yes 124191025
chr12 121297786 121297807 LUN1 TRANSFAC yes 124191026
Genes associated with rs562660020[chr12:121297790], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More