EnhancerDB
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  3. rs562665947[chr3:176862589]
Enhancers that have rs562665947[chr3:176862589]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 176855125 176871295 enh7690
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs562665947[chr3:176862589]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 176862581 176862597 POU4F2 JASPAR yes 7838753
chr3 176862581 176862597 POU4F3 JASPAR yes 7838754
chr3 176862581 176862597 POU4F2 JASPAR yes 71089840
chr3 176862581 176862597 POU4F3 JASPAR yes 71089841
chr3 176862583 176862597 POU4F1 JASPAR yes 7838755
chr3 176862583 176862597 POU4F1 JASPAR yes 71089842
chr3 176862584 176862597 DUXA JASPAR yes 7838756
chr3 176862584 176862597 DUXA JASPAR yes 71089843
chr3 176862585 176862596 DUX4 JASPAR yes 7838757
chr3 176862585 176862596 PHOX2A JASPAR yes 7838758
chr3 176862585 176862596 PROP1 JASPAR yes 7838759
chr3 176862585 176862596 DUX4 JASPAR yes 71089844
chr3 176862585 176862596 PHOX2A JASPAR yes 71089845
chr3 176862585 176862596 PROP1 JASPAR yes 71089846
chr3 176862587 176862601 ONECUT1 JASPAR yes 7838760
chr3 176862587 176862601 ONECUT2 JASPAR yes 7838761
chr3 176862587 176862601 ONECUT3 JASPAR yes 7838762
chr3 176862587 176862601 ONECUT1 JASPAR yes 71089847
chr3 176862587 176862601 ONECUT2 JASPAR yes 71089848
chr3 176862587 176862601 ONECUT3 JASPAR yes 71089849
Genes associated with rs562665947[chr3:176862589], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More