EnhancerDB
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  3. rs562678572[chr1:225650364]
Enhancers that have rs562678572[chr1:225650364]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562678572[chr1:225650364]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225650144 225650432 ZNF143 GTRD no Epithelial (MCF-7) 21384812
chr1 225650215 225650499 ZNF274 GTRD no Liver (HepG2) 21384813
chr1 225650350 225650371 ZNF263 JASPAR yes 35743519
chr1 225650352 225650373 ZNF263 JASPAR yes 35743521
chr1 225650353 225650374 ZNF263 JASPAR yes 35743522
chr1 225650357 225650378 ZNF263 JASPAR yes 35743523
chr1 225650359 225650365 MAZ TRANSFAC yes 35743524
chr1 225650359 225650369 SP1 JASPAR yes 35743525
chr1 225650360 225650370 MZF1 JASPAR yes 35743526
Genes associated with rs562678572[chr1:225650364], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More