EnhancerDB
  1. Home
  2. SNP
  3. rs56269638[chr17:62973893]
Enhancers that have rs56269638[chr17:62973893]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56269638[chr17:62973893]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62973872 62973893 IRF1 JASPAR yes 55334082
chr17 62973873 62973893 RREB1 JASPAR yes 55334084
chr17 62973873 62973894 IRF1 JASPAR yes 55334085
chr17 62973876 62973896 RREB1 JASPAR yes 55334089
chr17 62973878 62973893 FOXP1 JASPAR yes 55334091
chr17 62973881 62973901 RREB1 JASPAR yes 55334092
chr17 62973884 62973904 RREB1 JASPAR yes 55334093
chr17 62973887 62973907 RREB1 JASPAR yes 55334095
chr17 62973890 62973910 RREB1 JASPAR yes 55334096
chr17 62973893 62973913 RREB1 JASPAR yes 55334097
Genes associated with rs56269638[chr17:62973893], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More