EnhancerDB
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  3. rs562699190[chr1:155863824]
Enhancers that have rs562699190[chr1:155863824]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 155856385 155866134 enh12292
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs562699190[chr1:155863824]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 155863423 155864408 P63 GTRD no Skin (Keratinocyte) 21341757
chr1 155863443 155863827 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341761
chr1 155863445 155863885 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21341763
chr1 155863449 155864434 P63 GTRD no Skin (Keratinocyte) 21341764
chr1 155863508 155864374 P63 GTRD no Skin (Keratinocyte) 21341770
chr1 155863523 155863853 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341772
chr1 155863547 155864431 P63 GTRD no Skin (Keratinocyte) 21341776
chr1 155863816 155863830 TLX1 JASPAR yes 32366647
Genes associated with rs562699190[chr1:155863824], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More