EnhancerDB
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  3. rs562708896[chr14:68889427]
Enhancers that have rs562708896[chr14:68889427]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 68822645 68889661 enh15712
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs562708896[chr14:68889427]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 68889418 68889428 HOXC10 JASPAR yes 116216657
chr14 68889418 68889428 HOXD11 JASPAR yes 116216658
chr14 68889418 68889429 HOXA10 JASPAR yes 116216659
chr14 68889418 68889429 HOXC11 JASPAR yes 116216660
chr14 68889418 68889429 HOXC12 JASPAR yes 116216661
chr14 68889418 68889429 HOXC13 JASPAR yes 116216662
chr14 68889419 68889428 CDX1 JASPAR yes 116216663
chr14 68889419 68889430 CDX2 JASPAR yes 116216664
Genes associated with rs562708896[chr14:68889427], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More