EnhancerDB
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  3. rs562724306[chr12:125383028]
Enhancers that have rs562724306[chr12:125383028]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125380716 125396135 enh2679
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs562724306[chr12:125383028]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125382927 125383303 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21583238
chr12 125382972 125383448 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21583239
chr12 125382979 125383283 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21583240
chr12 125383001 125383311 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21583241
chr12 125383004 125383268 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21583242
chr12 125383017 125383377 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21583243
chr12 125383018 125383028 HOXD13 JASPAR yes 124430883
chr12 125383018 125383029 HOXA10 JASPAR yes 124430884
chr12 125383021 125383032 YY2 JASPAR yes 124430885
chr12 125383025 125383284 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21583244
chr12 125383025 125383395 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21583245
Genes associated with rs562724306[chr12:125383028], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More