EnhancerDB
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  3. rs562730907[chr10:33415888]
Enhancers that have rs562730907[chr10:33415888]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 33393842 33437095 enh1172
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr10 33415871 33415993 vista7089
VISTA
Transcript factors that have rs562730907[chr10:33415888]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 33415884 33415889 SP1 TRANSFAC yes 21075055
chr10 33415884 33415889 SP1 TRANSFAC yes 126573801
chr10 33415885 33415890 SP1 TRANSFAC yes 21075056
chr10 33415885 33415890 SP1 TRANSFAC yes 126573802
chr10 33415885 33415894 THAP1 JASPAR yes 21075057
chr10 33415885 33415894 THAP1 JASPAR yes 126573803
chr10 33415888 33415892 LFA1 TRANSFAC yes 21075058
chr10 33415888 33415892 LFA1 TRANSFAC yes 126573804
Genes associated with rs562730907[chr10:33415888], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More