EnhancerDB
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  3. rs562734779[chr3:149100283]
Enhancers that have rs562734779[chr3:149100283]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149097815 149115835 enh21019
Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Heart
chr3 149099928 149100323 vista42726
VISTA
Transcript factors that have rs562734779[chr3:149100283]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149099873 149100301 TCF12 UCSC Txn Factor no Conserved 108530640
chr3 149099874 149100290 EP300 UCSC Txn Factor no Conserved 108530641
chr3 149100268 149100283 HSF1 JASPAR yes 6488447
chr3 149100268 149100283 HSF1 JASPAR yes 71064842
chr3 149100277 149100291 RXRG JASPAR yes 6488449
chr3 149100277 149100291 RXRG JASPAR yes 71064844
chr3 149100278 149100294 ZNF143 JASPAR yes 6488450
chr3 149100278 149100294 ZNF143 JASPAR yes 71064845
chr3 149100282 149100291 PITX3 JASPAR yes 6488451
chr3 149100282 149100291 PITX3 JASPAR yes 71064846
chr3 149100282 149100292 GSC JASPAR yes 6488452
chr3 149100282 149100292 GSC JASPAR yes 71064847
chr3 149100283 149100291 RHOXF1 JASPAR yes 6488453
chr3 149100283 149100291 RHOXF1 JASPAR yes 71064848
Genes associated with rs562734779[chr3:149100283], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More