EnhancerDB
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  3. rs56273912[chr5:150447417]
Enhancers that have rs56273912[chr5:150447417]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 150446018 150466235 enh22725
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs56273912[chr5:150447417]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 150447414 150447419 SP1 TRANSFAC yes 66909535
Genes associated with rs56273912[chr5:150447417], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr5 149569520 149602351 + SLC6A7 ENSG00000011083.4 149569520 845066 Ovary 0.349406 5876