EnhancerDB
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  3. rs562821741[chr17:57703039]
Enhancers that have rs562821741[chr17:57703039]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57699645 57721455 enh4504
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Esophagus Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs562821741[chr17:57703039]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57703023 57703044 IRF1 JASPAR yes 55071614
chr17 57703028 57703049 IRF1 JASPAR yes 55071615
chr17 57703032 57703046 STAT1 JASPAR yes 55071616
chr17 57703032 57703047 PRDM1 JASPAR yes 55071617
chr17 57703032 57703047 STAT2 JASPAR yes 55071618
chr17 57703032 57703050 IRF2 JASPAR yes 55071619
chr17 57703036 57703041 ETS2 TRANSFAC yes 55071620
chr17 57703039 57703043 NFE TRANSFAC yes 55071621
Genes associated with rs562821741[chr17:57703039], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More