EnhancerDB
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  3. rs562855460[chr17:29817128]
Enhancers that have rs562855460[chr17:29817128]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 29816091 29829595 enh4360
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Lung (PC-9) Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs562855460[chr17:29817128]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 29816554 29817170 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21750061
chr17 29816554 29817170 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108249372
chr17 29816654 29817184 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108249375
chr17 29816667 29817187 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21750064
chr17 29816667 29817187 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108249378
chr17 29816680 29817196 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108249379
chr17 29816711 29817167 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21750065
chr17 29816711 29817167 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108249382
chr17 29816748 29817148 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108249387
chr17 29816807 29817131 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21750070
chr17 29816807 29817131 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108249393
chr17 29816846 29817156 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108249396
chr17 29817110 29817128 ESR2 JASPAR yes 53841814
chr17 29817112 29817132 ESR1 JASPAR yes 53841816
chr17 29817127 29817133 ETS1 JASPAR yes 53841818
chr17 29817127 29817133 SPI1 JASPAR yes 53841819
Genes associated with rs562855460[chr17:29817128], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More