EnhancerDB
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  3. rs562860149[chr1:12614603]
Enhancers that have rs562860149[chr1:12614603]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12597605 12619763 enh11515
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs562860149[chr1:12614603]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12612973 12621161 ZNF274 GTRD no Bone Marrow (K562) 107802127
chr1 12612973 12621161 ZNF274 GTRD no Bone Marrow (K562) 107802128
chr1 12614599 12614618 RFX2 JASPAR yes 26833348
chr1 12614600 12614615 HSF1 JASPAR yes 26833349
chr1 12614601 12614614 HSF4 JASPAR yes 26833350
chr1 12614603 12614611 FOXO3 JASPAR yes 26833351
chr1 12614603 12614619 RFX2 JASPAR yes 26833352
chr1 12614603 12614619 RFX3 JASPAR yes 26833353
chr1 12614603 12614619 RFX4 JASPAR yes 26833354
chr1 12614603 12614619 RFX5 JASPAR yes 26833355
Genes associated with rs562860149[chr1:12614603], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More