EnhancerDB
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  3. rs562877696[chr1:209588335]
Enhancers that have rs562877696[chr1:209588335]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209568193 209597635 enh12617
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs562877696[chr1:209588335]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209585538 209588619 ZBTB33 GTRD no Brain (SK-N-SH) 107865749
chr1 209587177 209588554 ZNF274 GTRD no Cervix (HeLa-S3) 21375312
chr1 209587280 209589178 ZNF274 GTRD no Cervix (HeLa-S3) 21375313
chr1 209587324 209588492 ZNF143 GTRD no Epithelial (MCF-7) 21375314
chr1 209587343 209588362 ZNF143 GTRD no Epithelial (MCF-7) 21375315
chr1 209587378 209588411 ZNF143 GTRD no Epithelial (MCF-7) 21375316
chr1 209587378 209588443 ZNF143 GTRD no Epithelial (MCF-7) 21375317
chr1 209587399 209588527 ZNF143 GTRD no Epithelial (MCF-7) 21375318
chr1 209587432 209588804 AR GTRD no Prostate (PC-3) 21375321
chr1 209587433 209588554 ZNF274 GTRD no Cervix (HeLa-S3) 21375322
chr1 209587441 209588430 ZNF143 GTRD no Epithelial (MCF-7) 21375323
chr1 209587459 209588360 ZNF143 GTRD no Epithelial (MCF-7) 21375325
chr1 209587489 209588385 ZNF274 GTRD no Cervix (HeLa-S3) 21375328
chr1 209587538 209588426 ZNF274 GTRD no Cervix (HeLa-S3) 21375331
chr1 209587539 209588335 ZNF143 GTRD no Epithelial (MCF-7) 21375332
chr1 209587562 209588396 ZNF143 GTRD no Epithelial (MCF-7) 21375335
chr1 209587567 209588483 ZNF274 GTRD no Cervix (HeLa-S3) 21375337
chr1 209587576 209588395 ZBTB33 GTRD no Lung (A549) 21375338
chr1 209587607 209588498 ZBTB33 GTRD no Lung (A549) 21375343
chr1 209587648 209588533 ZNF274 GTRD no Cervix (HeLa-S3) 21375348
chr1 209587694 209588375 ZNF143 GTRD no Epithelial (MCF-7) 21375355
chr1 209587730 209588596 ZNF274 GTRD no Cervix (HeLa-S3) 21375359
chr1 209587751 209588428 ZNF274 GTRD no Cervix (HeLa-S3) 21375362
chr1 209587798 209588549 ZNF274 GTRD no Cervix (HeLa-S3) 21375367
chr1 209587802 209588377 ZNF274 GTRD no Cervix (HeLa-S3) 21375368
chr1 209588329 209589428 ZNF274 GTRD no Cervix (HeLa-S3) 21375371
chr1 209588329 209589428 ZNF274 GTRD no Cervix (HeLa-S3) 107865764
Genes associated with rs562877696[chr1:209588335], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More