EnhancerDB
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  3. rs562880003[chr3:186671863]
Enhancers that have rs562880003[chr3:186671863]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 186665345 186714055 enh7749
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs562880003[chr3:186671863]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 186671856 186671868 TAL1 JASPAR yes 8363121
chr3 186671857 186671869 BHLHE23 JASPAR yes 8363122
chr3 186671858 186671868 BHLHE22 JASPAR yes 8363123
chr3 186671858 186671868 NEUROD2 JASPAR yes 8363124
chr3 186671858 186671868 NEUROG2 JASPAR yes 8363125
chr3 186671858 186671868 OLIG1 JASPAR yes 8363126
chr3 186671858 186671868 OLIG2 JASPAR yes 8363127
chr3 186671858 186671868 OLIG3 JASPAR yes 8363128
chr3 186671858 186671870 TAL1 JASPAR yes 8363129
Genes associated with rs562880003[chr3:186671863], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More