EnhancerDB
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  3. rs562888140[chr16:69572682]
Enhancers that have rs562888140[chr16:69572682]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 69559096 69575635 enh4114
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs562888140[chr16:69572682]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 69572670 69572687 PAX1 JASPAR yes 11279162
chr16 69572670 69572687 PAX9 JASPAR yes 11279163
chr16 69572672 69572686 PAX6 JASPAR yes 11279164
chr16 69572682 69572692 RORA JASPAR yes 11279165
Genes associated with rs562888140[chr16:69572682], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More