EnhancerDB
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  3. rs562893148[chr1:201508596]
Enhancers that have rs562893148[chr1:201508596]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201492445 201517481 enh12522
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Heart
chr1 201508517 201509575 vista4558
VISTA
Transcript factors that have rs562893148[chr1:201508596]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201504593 201515974 ZNF143 GTRD no Epithelial (MCF-7) 107856607
chr1 201504593 201515974 ZNF143 GTRD no Epithelial (MCF-7) 107856608
chr1 201505228 201509085 ZNF143 GTRD no Epithelial (MCF-7) 107856609
chr1 201507652 201509722 POLR2A UCSC Txn Factor no Conserved 107856610
chr1 201508298 201508954 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107856613
chr1 201508511 201509475 AR GTRD no Prostate (PC-3) 21364574
chr1 201508511 201509475 AR GTRD no Prostate (PC-3) 107856614
chr1 201508567 201509011 GATA2 UCSC Txn Factor no Conserved 107856615
chr1 201508595 201508604 TFAP2A JASPAR yes 34504108
chr1 201508595 201508604 TFAP2A JASPAR yes 118431968
Genes associated with rs562893148[chr1:201508596], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More