EnhancerDB
  1. Home
  2. SNP
  3. rs562927540[chr6:111743395]
Enhancers that have rs562927540[chr6:111743395]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 111737229 111755635 enh9318
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs562927540[chr6:111743395]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 111743391 111743398 NKX3-1 JASPAR yes 104341417
chr6 111743395 111743412 ZNF410 JASPAR yes 104341418
Genes associated with rs562927540[chr6:111743395], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More