EnhancerDB
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  3. rs56293540[chr12:52672222]
Enhancers that have rs56293540[chr12:52672222]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52669305 52679150 enh14728
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs56293540[chr12:52672222]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52672216 52672237 IRF1 JASPAR yes 120934027
chr12 52672217 52672238 IRF1 JASPAR yes 120934028
chr12 52672218 52672233 STAT2 JASPAR yes 120934029
chr12 52672219 52672240 IRF1 JASPAR yes 120934030
chr12 52672220 52672241 IRF1 JASPAR yes 120934031
chr12 52672221 52672236 FOXP1 JASPAR yes 120934032
chr12 52672221 52672242 IRF1 JASPAR yes 120934033
chr12 52672222 52672237 FOXP1 JASPAR yes 120934034
Genes associated with rs56293540[chr12:52672222], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More