EnhancerDB
  1. Home
  2. SNP
  3. rs56294208[chr1:180500317]
Enhancers that have rs56294208[chr1:180500317]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180482964 180504974 enh12423
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs56294208[chr1:180500317]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180499334 180500439 P63 GTRD no Skin (Keratinocyte) 21353385
chr1 180499393 180501751 ZNF274 GTRD no Bone Marrow (K562) 21353386
chr1 180499451 180500514 P63 GTRD no Skin (Keratinocyte) 21353387
chr1 180499473 180500332 P63 GTRD no Skin (Keratinocyte) 21353388
chr1 180499490 180500418 P63 GTRD no Skin (Keratinocyte) 21353389
chr1 180499793 180500626 ZNF274 GTRD no Bone Marrow (K562) 21353392
chr1 180500079 180500609 ZNF274 GTRD no Liver (HepG2) 21353393
chr1 180500111 180500590 ZNF274 GTRD no Liver (HepG2) 21353394
chr1 180500114 180500483 ZNF274 GTRD no Liver (HepG2) 21353395
chr1 180500307 180500328 IRF1 JASPAR yes 33521953
chr1 180500310 180500324 SPI1 JASPAR yes 33521957
chr1 180500311 180500332 IRF1 JASPAR yes 33521958
chr1 180500312 180500333 IRF1 JASPAR yes 33521959
chr1 180500313 180500318 ETS2 TRANSFAC yes 33521960
chr1 180500313 180500334 IRF1 JASPAR yes 33521961
chr1 180500314 180500335 IRF1 JASPAR yes 33521962
chr1 180500315 180500330 FOXP1 JASPAR yes 33521963
chr1 180500315 180500336 IRF1 JASPAR yes 33521964
chr1 180500316 180500331 FOXP1 JASPAR yes 33521965
chr1 180500316 180500337 IRF1 JASPAR yes 33521966
chr1 180500317 180500332 FOXP1 JASPAR yes 33521967
chr1 180500317 180500338 IRF1 JASPAR yes 33521968
Genes associated with rs56294208[chr1:180500317], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More