EnhancerDB
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  3. rs562945052[chr1:209581822]
Enhancers that have rs562945052[chr1:209581822]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209568193 209597635 enh12617
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs562945052[chr1:209581822]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209581813 209581825 POU3F1 JASPAR yes 34972695
chr1 209581813 209581826 POU3F3 JASPAR yes 34972696
chr1 209581815 209581824 POU5F1B JASPAR yes 34972697
Genes associated with rs562945052[chr1:209581822], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More