EnhancerDB
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  3. rs562946199[chr1:25036219]
Enhancers that have rs562946199[chr1:25036219]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562946199[chr1:25036219]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25017364 25039918 ZNF274 GTRD no Blood (GM12878) 21325292
chr1 25036204 25036222 MAFF JASPAR yes 27521369
chr1 25036206 25036221 MAFK JASPAR yes 27521370
chr1 25036211 25036222 FOS JASPAR yes 27521372
chr1 25036211 25036222 FOSL1 JASPAR yes 27521373
chr1 25036211 25036222 JUND JASPAR yes 27521374
chr1 25036212 25036226 JUN JASPAR yes 27521375
chr1 25036213 25036224 BATF JASPAR yes 27521376
chr1 25036213 25036224 DUX4 JASPAR yes 27521377
chr1 25036218 25036222 YY1 TRANSFAC yes 27521378
Genes associated with rs562946199[chr1:25036219], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More