EnhancerDB
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  3. rs56296026[chr1:232754229]
Enhancers that have rs56296026[chr1:232754229]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
chr1 232753930 232757436 vista147
VISTA
Transcript factors that have rs56296026[chr1:232754229]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232754216 232754229 NFKB1 JASPAR yes 36177921
chr1 232754216 232754229 NFKB2 JASPAR yes 36177922
chr1 232754216 232754229 NFKB1 JASPAR yes 71162502
chr1 232754216 232754229 NFKB2 JASPAR yes 71162503
Genes associated with rs56296026[chr1:232754229], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More