EnhancerDB
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  3. rs562965836[chr12:123612992]
Enhancers that have rs562965836[chr12:123612992]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 123594465 123621595 enh15080
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs562965836[chr12:123612992]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 123612987 123613002 MEF2C JASPAR yes 124321749
chr12 123612987 123613008 IRF1 JASPAR yes 124321750
chr12 123612989 123613004 FOXP1 JASPAR yes 124321751
chr12 123612990 123613005 FOXP1 JASPAR yes 124321752
chr12 123612991 123612997 TBP TRANSFAC yes 124321753
chr12 123612991 123613006 FOXP1 JASPAR yes 124321754
chr12 123612991 123613012 IRF1 JASPAR yes 124321755
chr12 123612992 123613007 FOXP1 JASPAR yes 124321756
chr12 123612992 123613013 IRF1 JASPAR yes 124321757
Genes associated with rs562965836[chr12:123612992], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More