EnhancerDB
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  3. rs562988343[chr1:205245798]
Enhancers that have rs562988343[chr1:205245798]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205243649 205259635 enh893
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Heart
Transcript factors that have rs562988343[chr1:205245798]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205245317 205245821 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21371208
chr1 205245363 205245866 ZNF143 GTRD no Epithelial (MCF-7) 21371209
chr1 205245380 205245808 ZNF143 GTRD no Epithelial (MCF-7) 21371210
chr1 205245798 205245812 BATF3 JASPAR yes 34750152
Genes associated with rs562988343[chr1:205245798], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More