EnhancerDB
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  3. rs56299563[chr12:125382565]
Enhancers that have rs56299563[chr12:125382565]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125380716 125396135 enh2679
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs56299563[chr12:125382565]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125380477 125382882 ZNF274 GTRD no Bone Marrow (K562) 21583218
chr12 125382562 125382577 FOXP1 JASPAR yes 124430798
chr12 125382563 125382578 FOXP1 JASPAR yes 124430799
chr12 125382563 125382584 IRF1 JASPAR yes 124430800
chr12 125382564 125382579 FOXP1 JASPAR yes 124430801
Genes associated with rs56299563[chr12:125382565], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More