EnhancerDB
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  3. rs562999012[chr1:27895329]
Enhancers that have rs562999012[chr1:27895329]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs562999012[chr1:27895329]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27895328 27895341 NFKB1 JASPAR yes 27710278
chr1 27895328 27895341 NFKB2 JASPAR yes 27710279
chr1 27895329 27895340 NFKB1 JASPAR yes 27710280
chr1 27895329 27895342 NFKB1 JASPAR yes 27710281
chr1 27895329 27895342 NFKB2 JASPAR yes 27710282
Genes associated with rs562999012[chr1:27895329], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More