EnhancerDB
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  3. rs56299950[chr17:55616418]
Enhancers that have rs56299950[chr17:55616418]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56299950[chr17:55616418]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55616407 55616419 POU2F1 JASPAR yes 54966355
chr17 55616407 55616420 POU3F3 JASPAR yes 54966356
chr17 55616407 55616421 POU1F1 JASPAR yes 54966357
chr17 55616408 55616420 POU3F1 JASPAR yes 54966358
chr17 55616408 55616420 POU3F2 JASPAR yes 54966359
chr17 55616409 55616418 POU3F4 JASPAR yes 54966360
chr17 55616409 55616418 POU5F1B JASPAR yes 54966361
chr17 55616409 55616422 ZBTB18 JASPAR yes 54966362
Genes associated with rs56299950[chr17:55616418], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More