EnhancerDB
  1. Home
  2. SNP
  3. rs563020294[chr16:88260425]
Enhancers that have rs563020294[chr16:88260425]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs563020294[chr16:88260425]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88260180 88260600 ZNF143 GTRD no Epithelial (MCF-7) 21735435
chr16 88260412 88260426 MTF1 JASPAR yes 12267742
Genes associated with rs563020294[chr16:88260425], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More